Towards an Evolvable Cancer Treatment Simulator

12/19/2018
by   Richard J. Preen, et al.
0

The use of high-fidelity computational simulations promises to enable high-throughput hypothesis testing and optimisation of cancer therapies. However, increasing realism comes at the cost of increasing computational requirements. This article explores the use of surrogate-assisted evolutionary algorithms to optimise the targeted delivery of a therapeutic compound to cancerous tumour cells with the multicellular simulator, PhysiCell. The use of both Gaussian process models and multi-layer perceptron neural network surrogate models are investigated. We find that evolutionary algorithms are able to effectively explore the parameter space of biophysical properties within the agent-based simulations, minimising the resulting number of cancerous cells after a period of simulated treatment. Both model-assisted algorithms are found to outperform a standard evolutionary algorithm, demonstrating their ability to perform a more effective search within the very small evaluation budget.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
10/31/2022

Exploring the effectiveness of surrogate-assisted evolutionary algorithms on the batch processing problem

Real-world optimisation problems typically have objective functions whic...
research
11/01/2016

Surrogate-Assisted Partial Order-based Evolutionary Optimisation

In this paper, we propose a novel approach (SAPEO) to support the surviv...
research
05/25/2021

Towards open-ended evolutionary simulator for developing novel tumour drug delivery systems

Tumours behave as moving targets that can evade chemotherapeutic treatme...
research
11/10/2020

Evolving Nano Particle Cancer Treatments with Multiple Particle Types

Evolutionary algorithms have long been used for optimization problems wh...
research
02/01/2021

Evolutionary computational platform for the automatic discovery of nanocarriers for cancer treatment

We present the EVONANO platform for the evolution of nanomedicines with ...
research
05/05/2023

Initial Steps Towards Tackling High-dimensional Surrogate Modeling for Neuroevolution Using Kriging Partial Least Squares

Surrogate-assisted evolutionary algorithms (SAEAs) aim to use efficient ...
research
03/21/2020

Utilizing Differential Evolution into optimizing targeted cancer treatments

Working towards the development of an evolvable cancer treatment simulat...

Please sign up or login with your details

Forgot password? Click here to reset