
Longest Common Prefixes with kErrors and Applications
Although realworld text datasets, such as DNA sequences, are far from b...
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LinearTime Algorithm for Long LCF with k Mismatches
In the Longest Common Factor with k Mismatches (LCF_k) problem, we are g...
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Longest Common Factor Made Fully Dynamic
In the longest common factor (LCF) problem, we are given two strings S a...
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Alignmentfree sequence comparison using absent words
Sequence comparison is a prerequisite to virtually all comparative genom...
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Exact Distance Oracles for Planar Graphs with Failing Vertices
We consider exact distance oracles for directed weighted planar graphs i...
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Efficient Computation of Sequence Mappability
Sequence mappability is an important task in genome resequencing. In th...
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Almost Optimal Distance Oracles for Planar Graphs
We present new tradeoffs between space and querytime for exact distance...
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Circular Pattern Matching with k Mismatches
The kmismatch problem consists in computing the Hamming distance betwee...
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Internal Dictionary Matching
We introduce data structures answering queries concerning the occurrence...
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Weighted Shortest Common Supersequence Problem Revisited
A weighted string, also known as a position weight matrix, is a sequence...
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Faster Approximate Pattern Matching: A Unified Approach
Approximate pattern matching is a natural and wellstudied problem on st...
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Counting Distinct Patterns in Internal Dictionary Matching
We consider the problem of preprocessing a text T of length n and a dict...
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Pattern Masking for Dictionary Matching
In the Pattern Masking for Dictionary Matching (PMDM) problem, we are gi...
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The Number of Repetitions in 2DStrings
The notions of periodicity and repetitions in strings, and hence these o...
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Dynamic Longest Common Substring in Polylogarithmic Time
The longest common substring problem consists in finding a longest strin...
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Panagiotis Charalampopoulos
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