Unifying and Personalizing Weakly-supervised Federated Medical Image Segmentation via Adaptive Representation and Aggregation

04/12/2023
by   Li Lin, et al.
0

Federated learning (FL) enables multiple sites to collaboratively train powerful deep models without compromising data privacy and security. The statistical heterogeneity (e.g., non-IID data and domain shifts) is a primary obstacle in FL, impairing the generalization performance of the global model. Weakly supervised segmentation, which uses sparsely-grained (i.e., point-, bounding box-, scribble-, block-wise) supervision, is increasingly being paid attention to due to its great potential of reducing annotation costs. However, there may exist label heterogeneity, i.e., different annotation forms across sites. In this paper, we propose a novel personalized FL framework for medical image segmentation, named FedICRA, which uniformly leverages heterogeneous weak supervision via adaptIve Contrastive Representation and Aggregation. Concretely, to facilitate personalized modeling and to avoid confusion, a channel selection based site contrastive representation module is employed to adaptively cluster intra-site embeddings and separate inter-site ones. To effectively integrate the common knowledge from the global model with the unique knowledge from each local model, an adaptive aggregation module is applied for updating and initializing local models at the element level. Additionally, a weakly supervised objective function that leverages a multiscale tree energy loss and a gated CRF loss is employed to generate more precise pseudo-labels and further boost the segmentation performance. Through extensive experiments on two distinct medical image segmentation tasks of different modalities, the proposed FedICRA demonstrates overwhelming performance over other state-of-the-art personalized FL methods. Its performance even approaches that of fully supervised training on centralized data. Our code and data are available at https://github.com/llmir/FedICRA.

READ FULL TEXT

page 2

page 10

research
07/11/2022

Personalizing Federated Medical Image Segmentation via Local Calibration

Medical image segmentation under federated learning (FL) is a promising ...
research
04/23/2022

Federated Contrastive Learning for Volumetric Medical Image Segmentation

Supervised deep learning needs a large amount of labeled data to achieve...
research
02/04/2023

Weakly-Supervised 3D Medical Image Segmentation using Geometric Prior and Contrastive Similarity

Medical image segmentation is almost the most important pre-processing p...
research
05/01/2020

ACCL: Adversarial constrained-CNN loss for weakly supervised medical image segmentation

We propose adversarial constrained-CNN loss, a new paradigm of constrain...
research
07/13/2022

One Model to Unite Them All: Personalized Federated Learning of Multi-Contrast MRI Synthesis

Learning-based MRI translation involves a synthesis model that maps a so...
research
12/11/2022

YoloCurvSeg: You Only Label One Noisy Skeleton for Vessel-style Curvilinear Structure Segmentation

Weakly-supervised learning (WSL) has been proposed to alleviate the conf...

Please sign up or login with your details

Forgot password? Click here to reset