The I-ADOPT Interoperability Framework for FAIRer data descriptions of biodiversity

07/14/2021
by   Barbara Magagna, et al.
0

Biodiversity, the variation within and between species and ecosystems, is essential for human well-being and the equilibrium of the planet. It is critical for the sustainable development of human society and is an important global challenge. Biodiversity research has become increasingly data-intensive and it deals with heterogeneous and distributed data made available by global and regional initiatives, such as GBIF, ILTER, LifeWatch, BODC, PANGAEA, and TERN, that apply different data management practices. In particular, a variety of metadata and semantic resources have been produced by these initiatives to describe biodiversity observations, introducing interoperability issues across data management systems. To address these challenges, the InteroperAble Descriptions of Observable Property Terminology WG (I-ADOPT WG) was formed by a group of international terminology providers and data center managers in 2019 with the aim to build a common approach to describe what is observed, measured, calculated, or derived. Based on an extensive analysis of existing semantic representations of variables, the WG has recently published the I-ADOPT framework ontology to facilitate interoperability between existing semantic resources and support the provision of machine-readable variable descriptions whose components are mapped to FAIR vocabulary terms. The I-ADOPT framework ontology defines a set of high level semantic components that can be used to describe a variety of patterns commonly found in scientific observations. This contribution will focus on how the I-ADOPT framework can be applied to represent variables commonly used in the biodiversity domain.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
05/14/2020

Towards NLP-supported Semantic Data Management

The heterogeneity of data poses a great challenge when data from differe...
research
12/26/2010

Ontology-based Queries over Cancer Data

The ever-increasing amount of data in biomedical research, and in cancer...
research
08/12/2021

Ontology Service Center: a datahub for ontology application

With the growth of data-oriented research in humanities, a large number ...
research
09/18/2023

An Ontology of Dark Patterns Knowledge: Foundations, Definitions, and a Pathway for Shared Knowledge-Building

Deceptive and coercive design practices are increasingly used by compani...
research
11/23/2022

FAIRification of MLC data

The multi-label classification (MLC) task has increasingly been receivin...
research
06/23/2017

A Semantic Cross-Species Derived Data Management Application

Managing dynamic information in large multi-site, multi-species, and mul...

Please sign up or login with your details

Forgot password? Click here to reset