Telescope: an interactive tool for managing large scale analysis from mobile devices

09/27/2019
by   Jaqueline J. Brito, et al.
0

In today's world of big data, computational analysis has become a key driver of biomedical research. Recent exponential growth in the volume of available omics data has reshaped the landscape of contemporary biology, creating demand for a continuous feedback loop that seamlessly integrates experimental biology techniques and bioinformatics tools. High-performance computational facilities are capable of processing considerable volumes of data, yet often lack an easy-to-use interface to guide the user in supervising and adjusting bioinformatics analysis in real-time. Here we report the development of Telescope, a novel interactive tool that interfaces with high-performance computational clusters to deliver an intuitive user interface for controlling and monitoring bioinformatics analyses in real-time. Telescope was designed to natively operate with a simple and straightforward interface using Web 2.0 technology compatible with most modern devices (e.g., tablets and personal smartphones). Telescope provides a modern and elegant solution to integrate computational analyses into the experimental environment of biomedical research. Additionally, it allows biomedical researchers to leverage the power of large computational facilities in a user-friendly manner. Telescope is freely available at https://github.com/Mangul-Lab-USC/telescope.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
11/29/2021

ZCSD: a Computational Storage Device over Zoned Namespaces (ZNS) SSDs

The Big Data trend is putting strain on modern storage systems, which ha...
research
01/26/2015

JMS: A workflow management system and web-based cluster front-end for the Torque resource manager

Motivation: Complex computational pipelines are becoming a staple of mod...
research
08/03/2022

SmartControllerJS: A JavaScript library to turn smartphones into controllers for web-based interactive experiments

We introduce SmartControllerJS, a new JavaScript library for fast, cost-...
research
07/15/2022

STRIKE-GOLDD 4.0: user-friendly, efficient analysis of structural identifiability and observability

Structural identifiability and observability are desirable properties of...
research
07/17/2023

regulAS: A Bioinformatics Tool for the Integrative Analysis of Alternative Splicing Regulome using RNA-Seq data

The regulAS software package is a bioinformatics tool designed to suppor...
research
07/21/2021

Design of a Graphical User Interface for Few-Shot Machine Learning Classification of Electron Microscopy Data

The recent growth in data volumes produced by modern electron microscope...
research
11/15/2022

Taming Large-Scale Genomic Analyses via Sparsified Genomics

Searching for similar genomic sequences is an essential and fundamental ...

Please sign up or login with your details

Forgot password? Click here to reset