Synchronizing Boolean networks asynchronously

03/10/2022
by   Julio Aracena, et al.
0

The asynchronous automaton associated with a Boolean network f:{0,1}^n→{0,1}^n, considered in many applications, is the finite deterministic automaton where the set of states is {0,1}^n, the alphabet is [n], and the action of letter i on a state x consists in either switching the ith component if f_i(x)≠ x_i or doing nothing otherwise. These actions are extended to words in the natural way. A word is then synchronizing if the result of its action is the same for every state. In this paper, we ask for the existence of synchronizing words, and their minimal length, for a basic class of Boolean networks called and-or-nets: given an arc-signed digraph G on [n], we say that f is an and-or-net on G if, for every i∈ [n], there is a such that, for all state x, f_i(x)=a if and only if x_j=a (x_j≠ a) for every positive (negative) arc from j to i; so if a=1 (a=0) then f_i is a conjunction (disjunction) of positive or negative literals. Our main result is that if G is strongly connected and has no positive cycles, then either every and-or-net on G has a synchronizing word of length at most 10(√(5)+1)^n, much smaller than the bound (2^n-1)^2 given by the well known Černý's conjecture, or G is a cycle and no and-or-net on G has a synchronizing word. This contrasts with the following complexity result: it is coNP-hard to decide if every and-or-net on G has a synchronizing word, even if G is strongly connected or has no positive cycles.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
02/06/2018

Fixing monotone Boolean networks asynchronously

The asynchronous automaton associated with a Boolean network f:{0,1}^n→{...
research
01/21/2022

Positive and negative cycles in Boolean networks

We review and discuss some results about the influence of positive and n...
research
04/05/2018

On fixable families of Boolean networks

The asynchronous dynamics associated with a Boolean network f : {0,1}^n ...
research
09/04/2023

Loopless Algorithms to Generate Maximum Length Gray Cycles wrt. k-Character Substitution

Given a binary word relation τ onto A * and a finite language X ⊆ A * , ...
research
03/21/2022

Complexity of limit cycles with block-sequential update schedules in conjunctive networks

In this paper, we deal the following decision problem: given a conjuncti...
research
06/23/2022

Attractor separation and signed cycles in asynchronous Boolean networks

The structure of the graph defined by the interactions in a Boolean netw...
research
11/07/2017

Learning Overcomplete HMMs

We study the problem of learning overcomplete HMMs---those that have man...

Please sign up or login with your details

Forgot password? Click here to reset