SISE-PC: Semi-supervised Image Subsampling for Explainable Pathology

02/23/2021
by   Sohini Roychowdhury, et al.
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Although automated pathology classification using deep learning (DL) has proved to be predictively efficient, DL methods are found to be data and compute cost intensive. In this work, we aim to reduce DL training costs by pre-training a Resnet feature extractor using SimCLR contrastive loss for latent encoding of OCT images. We propose a novel active learning framework that identifies a minimal sub-sampled dataset containing the most uncertain OCT image samples using label propagation on the SimCLR latent encodings. The pre-trained Resnet model is then fine-tuned with the labelled minimal sub-sampled data and the underlying pathological sites are visually explained. Our framework identifies upto 2 prioritized specialist attention and that can fine-tune a Resnet model to achieve upto 97 to other medical images to minimize prediction costs.

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