Simulating Evolution on Fitness Landscapes represented by Valued Constraint Satisfaction Problems

12/04/2019
by   Alexandru Strimbu, et al.
0

Recent theoretical research proposes that computational complexity can be seen as an ultimate constraint that allows for open-ended biological evolution on finite static fitness landscapes. Whereas on easy fitness landscapes, evolution will quickly converge to a local fitness peaks, on hard fitness landscapes this computational constraints prevents evolution from reaching any local fitness peak in polynomial time. Valued constraint satisfaction problems (VCSPs) can be used to represent both easy and hard fitness landscapes. Thus VCSPS can be seen as a natural way of linking the theory of evolution with notions of computer science to better understand the features that make landscapes hard. However, there are currently no simulators that study VCSP-structured fitness landscapes. This report describes the design and build of an evolution simulator for VCSP-structured fitness landscapes. The platform is used for simulating various instances of easy and hard fitness landscapes. In particular, we look at evolution under more realistic assumptions than fittest mutant strong-selection weak mutation dynamics on the winding semismooth fitness landscape. The results obtained match with the theoretical expectations, while also providing new information about the limits of evolution. The last part of the report introduces a mathematical model for smooth fitness landscapes and uses it to better understand why these landscapes are easy.

READ FULL TEXT

page 1

page 12

page 32

research
08/23/2013

Complexity of evolutionary equilibria in static fitness landscapes

A fitness landscape is a genetic space -- with two genotypes adjacent if...
research
07/02/2019

Representing fitness landscapes by valued constraints to understand the complexity of local search

Local search is widely used to solve combinatorial optimisation problems...
research
06/09/2018

A Preliminary Exploration of Floating Point Grammatical Evolution

Current GP frameworks are highly effective on a range of real and simula...
research
01/03/2001

Adaptive evolution on neutral networks

We study the evolution of large but finite asexual populations evolving ...
research
10/15/2021

Resolving Anomalies in the Behaviour of a Modularity Inducing Problem Domain with Distributional Fitness Evaluation

Discrete gene regulatory networks (GRNs) play a vital role in the study ...
research
09/26/2012

Efficient Natural Evolution Strategies

Efficient Natural Evolution Strategies (eNES) is a novel alternative to ...
research
06/15/2018

Parametric versus nonparametric: the fitness coefficient

The fitness coefficient, introduced in this paper, results from a compet...

Please sign up or login with your details

Forgot password? Click here to reset