Semi-Supervised Segmentation of Multi-vendor and Multi-center Cardiac MRI using Histogram Matching

02/22/2023
by   Mahyar Bolhassani, et al.
0

Automatic segmentation of the heart cavity is an essential task for the diagnosis of cardiac diseases. In this paper, we propose a semi-supervised segmentation setup for leveraging unlabeled data to segment Left-ventricle, Right-ventricle, and Myocardium. We utilize an enhanced version of residual U-Net architecture on a large-scale cardiac MRI dataset. Handling the class imbalanced data issue using dice loss, the enhanced supervised model is able to achieve better dice scores in comparison with a vanilla U-Net model. We applied several augmentation techniques including histogram matching to increase the performance of our model in other domains. Also, we introduce a simple but efficient semi-supervised segmentation method to improve segmentation results without the need for large labeled data. Finally, we applied our method on two benchmark datasets, STACOM2018, and M&Ms 2020 challenges, to show the potency of the proposed model. The effectiveness of our proposed model is demonstrated by the quantitative results. The model achieves average dice scores of 0.921, 0.926, and 0.891 for Left-ventricle, Right-ventricle, and Myocardium respectively.

READ FULL TEXT

page 1

page 2

page 4

page 5

research
12/27/2020

Histogram Matching Augmentation for Domain Adaptation with Application to Multi-Centre, Multi-Vendor and Multi-Disease Cardiac Image Segmentation

Convolutional Neural Networks (CNNs) have achieved high accuracy for car...
research
12/29/2020

Cascaded Framework for Automatic Evaluation of Myocardial Infarction from Delayed-Enhancement Cardiac MRI

Automatic evaluation of myocardium and pathology plays an important role...
research
08/06/2020

Pairwise Relation Learning for Semi-supervised Gland Segmentation

Accurate and automated gland segmentation on histology tissue images is ...
research
10/04/2022

Complementary consistency semi-supervised learning for 3D left atrial image segmentation

A network based on complementary consistency training (CC-Net) is propos...
research
11/08/2018

Explainable cardiac pathology classification on cine MRI with motion characterization by semi-supervised learning of apparent flow

We propose a method to classify cardiac pathology based on a novel appro...
research
08/21/2019

Pixel-wise Segmentation of Right Ventricle of Heart

One of the first steps in the diagnosis of most cardiac diseases, such a...
research
11/05/2019

GAN-enhanced Conditional Echocardiogram Generation

Echocardiography (echo) is a common means of evaluating cardiac conditio...

Please sign up or login with your details

Forgot password? Click here to reset