Self Organizing Nebulous Growths for Robust and Incremental Data Visualization

12/09/2019
by   Damith Senanayake, et al.
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Non-parametric dimensionality reduction techniques, such as t-SNE and UMAP, are proficient in providing visualizations for fixed or static datasets, but they cannot incrementally map and insert new data points into existing data visualizations. We present Self-Organizing Nebulous Growths (SONG), a parametric nonlinear dimensionality reduction technique that supports incremental data visualization, i.e., incremental addition of new data while preserving the structure of the existing visualization. In addition, SONG is capable of handling new data increments no matter whether they are similar or heterogeneous to the existing observations in distribution. We test SONG on a variety of real and simulated datasets. The results show that SONG is superior to Parametric t-SNE, t-SNE and UMAP in incremental data visualization. Specifically, for heterogeneous increments, SONG improves over Parametric t-SNE by 14.98 regarding the cluster quality measured by the Adjusted Mutual Information scores. On similar or homogeneous increments, the improvements are 8.36 42.26 comparable to UMAP, and superior to t-SNE. We also demonstrate that the algorithmic foundations of SONG render it more tolerant to noise compared to UMAP and t-SNE, thus providing greater utility for data with high variance or high mixing of clusters or noise.

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