Searching for a source of difference in Gaussian graphical models

11/06/2018
by   Vera Djordjilović, et al.
0

In this work, we look at a two-sample problem within the framework of Gaussian graphical models. When the global hypothesis of equality of two distributions is rejected, the interest is usually in localizing the source of difference. Motivated by the idea that diseases can be seen as system perturbations, and by the need to distinguish between the origin of perturbation and components affected by the perturbation, we introduce the concept of a minimal seed set, and its graphical counterpart a graphical seed set. They intuitively consist of variables driving the difference between the two conditions. We propose a simple testing procedure, linear in the number of nodes, to estimate the graphical seed set from data, and study its finite sample behavior with a stimulation study. We illustrate our approach in the context of gene set analysis by means of a publicly available gene expression dataset.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
08/11/2020

Locally associated graphical models

The notion of multivariate total positivity has proved to be useful in f...
research
05/07/2018

Learning Multiple Gene Regulatory Networks in Type 1 Diabetes through a Fast Bayesian Integrative Method

Accurate inference of Gene Regulatory Networks (GRNs) is pivotal to gain...
research
11/30/2020

Exponential decay of pairwise correlation in Gaussian graphical models with an equicorrelational one-dimensional connection pattern

We consider Gaussian graphical models associated with an equicorrelation...
research
07/29/2014

Sure Screening for Gaussian Graphical Models

We propose graphical sure screening, or GRASS, a very simple and computa...
research
03/21/2013

Node-Based Learning of Multiple Gaussian Graphical Models

We consider the problem of estimating high-dimensional Gaussian graphica...
research
09/06/2023

A modelling framework for detecting and leveraging node-level information in Bayesian network inference

Bayesian graphical models are powerful tools to infer complex relationsh...
research
04/05/2011

On Identifying Significant Edges in Graphical Models of Molecular Networks

Objective: Modelling the associations from high-throughput experimental ...

Please sign up or login with your details

Forgot password? Click here to reset