RetiFluidNet: A Self-Adaptive and Multi-Attention Deep Convolutional Network for Retinal OCT Fluid Segmentation

09/26/2022
by   Reza Rasti, et al.
0

Optical coherence tomography (OCT) helps ophthalmologists assess macular edema, accumulation of fluids, and lesions at microscopic resolution. Quantification of retinal fluids is necessary for OCT-guided treatment management, which relies on a precise image segmentation step. As manual analysis of retinal fluids is a time-consuming, subjective, and error-prone task, there is increasing demand for fast and robust automatic solutions. In this study, a new convolutional neural architecture named RetiFluidNet is proposed for multi-class retinal fluid segmentation. The model benefits from hierarchical representation learning of textural, contextual, and edge features using a new self-adaptive dual-attention (SDA) module, multiple self-adaptive attention-based skip connections (SASC), and a novel multi-scale deep self supervision learning (DSL) scheme. The attention mechanism in the proposed SDA module enables the model to automatically extract deformation-aware representations at different levels, and the introduced SASC paths further consider spatial-channel interdependencies for concatenation of counterpart encoder and decoder units, which improve representational capability. RetiFluidNet is also optimized using a joint loss function comprising a weighted version of dice overlap and edge-preserved connectivity-based losses, where several hierarchical stages of multi-scale local losses are integrated into the optimization process. The model is validated based on three publicly available datasets: RETOUCH, OPTIMA, and DUKE, with comparisons against several baselines. Experimental results on the datasets prove the effectiveness of the proposed model in retinal OCT fluid segmentation and reveal that the suggested method is more effective than existing state-of-the-art fluid segmentation algorithms in adapting to retinal OCT scans recorded by various image scanning instruments.

READ FULL TEXT

page 1

page 4

page 9

research
04/07/2017

ReLayNet: Retinal Layer and Fluid Segmentation of Macular Optical Coherence Tomography using Fully Convolutional Network

Optical coherence tomography (OCT) is used for non-invasive diagnosis of...
research
12/26/2022

OMSN and FAROS: OCTA Microstructure Segmentation Network and Fully Annotated Retinal OCTA Segmentation Dataset

The lack of efficient segmentation methods and fully-labeled datasets li...
research
09/28/2020

MPG-Net: Multi-Prediction Guided Network for Segmentation of Retinal Layers in OCT Images

Optical coherence tomography (OCT) is a commonly-used method of extracti...
research
09/05/2021

(M)SLAe-Net: Multi-Scale Multi-Level Attention embedded Network for Retinal Vessel Segmentation

Segmentation plays a crucial role in diagnosis. Studying the retinal vas...
research
03/16/2023

SwinVFTR: A Novel Volumetric Feature-learning Transformer for 3D OCT Fluid Segmentation

Accurately segmenting fluid in 3D volumetric optical coherence tomograph...
research
03/31/2023

The Topology-Overlap Trade-Off in Retinal Arteriole-Venule Segmentation

Retinal fundus images can be an invaluable diagnosis tool for screening ...
research
08/18/2023

SAMedOCT: Adapting Segment Anything Model (SAM) for Retinal OCT

The Segment Anything Model (SAM) has gained significant attention in the...

Please sign up or login with your details

Forgot password? Click here to reset