Reproducible and User-Controlled Software Environments in HPC with Guix

06/09/2015
by   Ludovic Courtès, et al.
0

Support teams of high-performance computing (HPC) systems often find themselves between a rock and a hard place: on one hand, they understandably administrate these large systems in a conservative way, but on the other hand, they try to satisfy their users by deploying up-to-date tool chains as well as libraries and scientific software. HPC system users often have no guarantee that they will be able to reproduce results at a later point in time, even on the same system-software may have been upgraded, removed, or recompiled under their feet, and they have little hope of being able to reproduce the same software environment elsewhere. We present GNU Guix and the functional package management paradigm and show how it can improve reproducibility and sharing among researchers with representative use cases.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
10/11/2021

Deploying Containerized QuantEx Quantum Simulation Software on HPC Systems

The simulation of quantum circuits using the tensor network method is ve...
research
09/01/2022

Reproducible Cross-border High Performance Computing for Scientific Portals

To reproduce eScience, several challenges need to be solved: scientific ...
research
10/09/2020

Analyzing HPC Support Tickets: Experience and Recommendations

High performance computing (HPC) user support teams are the first line o...
research
08/01/2018

Container solutions for HPC Systems: A Case Study of Using Shifter on Blue Waters

Software container solutions have revolutionized application development...
research
07/23/2020

[not Rp] Reproducibility of 'Poincare dodecahedral space parameter estimates'

Is a scientific research paper based on (i) public, online observational...
research
01/17/2021

Ten Simple Rules for Success with HPC, i.e. Responsibly BASHing that Linux Cluster

High-performance computing (HPC) clusters are widely used in-house at sc...
research
09/02/2018

A Serverless Tool for Platform Agnostic Computational Experiment Management

Neuroscience has been carried into the domain of big data and high perfo...

Please sign up or login with your details

Forgot password? Click here to reset