Removing the fat from your posterior samples with margarine

05/25/2022
by   Harry T. J. Bevins, et al.
0

Bayesian workflows often require the introduction of nuisance parameters, yet for core science modelling one needs access to a marginal posterior density. In this work we use masked autoregressive flows and kernel density estimators to encapsulate the marginal posterior, allowing us to compute marginal Kullback-Leibler divergences and marginal Bayesian model dimensionalities in addition to generating samples and computing marginal log probabilities. We demonstrate this in application to topical cosmological examples of the Dark Energy Survey, and global 21cm signal experiments. In addition to the computation of marginal Bayesian statistics, this work is important for further applications in Bayesian experimental design, complex prior modelling and likelihood emulation. This technique is made publicly available in the pip-installable code margarine.

READ FULL TEXT

page 6

page 7

research
06/30/2023

Learned harmonic mean estimation of the marginal likelihood with normalizing flows

Computing the marginal likelihood (also called the Bayesian model eviden...
research
04/12/2017

Beyond Uniform Priors in Bayesian Network Structure Learning

Bayesian network structure learning is often performed in a Bayesian set...
research
04/13/2022

Bayesian Integrals on Toric Varieties

We explore the positive geometry of statistical models in the setting of...
research
11/28/2018

19 dubious ways to compute the marginal likelihood of a phylogenetic tree topology

The marginal likelihood of a model is a key quantity for assessing the e...
research
11/24/2021

Machine learning assisted Bayesian model comparison: learnt harmonic mean estimator

We resurrect the infamous harmonic mean estimator for computing the marg...
research
07/03/2018

Probability Based Independence Sampler for Bayesian Quantitative Learning in Graphical Log-Linear Marginal Models

Bayesian methods for graphical log-linear marginal models have not been ...

Please sign up or login with your details

Forgot password? Click here to reset