Reference-Free Isotropic 3D EM Reconstruction using Diffusion Models

08/03/2023
by   Kyungryun Lee, et al.
0

Electron microscopy (EM) images exhibit anisotropic axial resolution due to the characteristics inherent to the imaging modality, presenting challenges in analysis and downstream tasks.In this paper, we propose a diffusion-model-based framework that overcomes the limitations of requiring reference data or prior knowledge about the degradation process. Our approach utilizes 2D diffusion models to consistently reconstruct 3D volumes and is well-suited for highly downsampled data. Extensive experiments conducted on two public datasets demonstrate the robustness and superiority of leveraging the generative prior compared to supervised learning methods. Additionally, we demonstrate our method's feasibility for self-supervised reconstruction, which can restore a single anisotropic volume without any training data.

READ FULL TEXT

page 7

page 8

research
09/17/2022

GedankenNet: Self-supervised learning of hologram reconstruction using physics consistency

The past decade has witnessed transformative applications of deep learni...
research
08/19/2023

Learning Multiscale Consistency for Self-supervised Electron Microscopy Instance Segmentation

Instance segmentation in electron microscopy (EM) volumes poses a signif...
research
09/02/2022

Self-Score: Self-Supervised Learning on Score-Based Models for MRI Reconstruction

Recently, score-based diffusion models have shown satisfactory performan...
research
01/08/2022

Deep Generative Modeling for Volume Reconstruction in Cryo-Electron Microscopy

Recent breakthroughs in high resolution imaging of biomolecules in solut...
research
04/11/2023

SPIRiT-Diffusion: Self-Consistency Driven Diffusion Model for Accelerated MRI

Diffusion models are a leading method for image generation and have been...
research
05/22/2023

GSURE-Based Diffusion Model Training with Corrupted Data

Diffusion models have demonstrated impressive results in both data gener...
research
06/24/2022

Source Localization of Graph Diffusion via Variational Autoencoders for Graph Inverse Problems

Graph diffusion problems such as the propagation of rumors, computer vir...

Please sign up or login with your details

Forgot password? Click here to reset