Pitman-Yor Diffusion Trees

06/13/2011
by   David A. Knowles, et al.
0

We introduce the Pitman Yor Diffusion Tree (PYDT) for hierarchical clustering, a generalization of the Dirichlet Diffusion Tree (Neal, 2001) which removes the restriction to binary branching structure. The generative process is described and shown to result in an exchangeable distribution over data points. We prove some theoretical properties of the model and then present two inference methods: a collapsed MCMC sampler which allows us to model uncertainty over tree structures, and a computationally efficient greedy Bayesian EM search algorithm. Both algorithms use message passing on the tree structure. The utility of the model and algorithms is demonstrated on synthetic and real world data, both continuous and binary.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
03/15/2012

Bayesian Rose Trees

Hierarchical structure is ubiquitous in data across many domains. There ...
research
04/19/2019

Continuous-Time Birth-Death MCMC for Bayesian Regression Tree Models

Decision trees are flexible models that are well suited for many statist...
research
02/27/2023

Detecting Jumps on a Tree: a Hierarchical Pitman-Yor Model for Evolution of Phenotypic Distributions

This work focuses on clustering populations with a hierarchical dependen...
research
03/27/2013

Minimum Error Tree Decomposition

This paper describes a generalization of previous methods for constructi...
research
09/16/2019

Bayesian inference of species trees using diffusion models

We describe a new and computationally efficient Bayesian methodology for...
research
07/10/2019

Coarse Graining of Data via Inhomogeneous Diffusion Condensation

Big data often has emergent structure that exists at multiple levels of ...
research
01/27/2020

Structural Information Learning Machinery: Learning from Observing, Associating, Optimizing, Decoding, and Abstracting

In the present paper, we propose the model of structural information le...

Please sign up or login with your details

Forgot password? Click here to reset