Negative Binomial Process Count and Mixture Modeling

09/15/2012
by   Mingyuan Zhou, et al.
0

The seemingly disjoint problems of count and mixture modeling are united under the negative binomial (NB) process. A gamma process is employed to model the rate measure of a Poisson process, whose normalization provides a random probability measure for mixture modeling and whose marginalization leads to an NB process for count modeling. A draw from the NB process consists of a Poisson distributed finite number of distinct atoms, each of which is associated with a logarithmic distributed number of data samples. We reveal relationships between various count- and mixture-modeling distributions and construct a Poisson-logarithmic bivariate distribution that connects the NB and Chinese restaurant table distributions. Fundamental properties of the models are developed, and we derive efficient Bayesian inference. It is shown that with augmentation and normalization, the NB process and gamma-NB process can be reduced to the Dirichlet process and hierarchical Dirichlet process, respectively. These relationships highlight theoretical, structural and computational advantages of the NB process. A variety of NB processes, including the beta-geometric, beta-NB, marked-beta-NB, marked-gamma-NB and zero-inflated-NB processes, with distinct sharing mechanisms, are also constructed. These models are applied to topic modeling, with connections made to existing algorithms under Poisson factor analysis. Example results show the importance of inferring both the NB dispersion and probability parameters.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
09/05/2012

Augment-and-Conquer Negative Binomial Processes

By developing data augmentation methods unique to the negative binomial ...
research
12/15/2011

Beta-Negative Binomial Process and Poisson Factor Analysis

A beta-negative binomial (BNB) process is proposed, leading to a beta-ga...
research
12/22/2017

Modeling Spatial Overdispersion with the Generalized Waring Process

Modeling spatial overdispersion requires point processes models with fin...
research
04/12/2014

Priors for Random Count Matrices Derived from a Family of Negative Binomial Processes

We define a family of probability distributions for random count matrice...
research
10/16/2012

A Slice Sampler for Restricted Hierarchical Beta Process with Applications to Shared Subspace Learning

Hierarchical beta process has found interesting applications in recent y...
research
04/25/2016

Nonparametric Bayesian Negative Binomial Factor Analysis

A common approach to analyze a covariate-sample count matrix, an element...
research
04/30/2019

Models for Genetic Diversity Generated by Negative Binomial Point Processes

We develop a model based on a generalised Poisson-Dirichlet distribution...

Please sign up or login with your details

Forgot password? Click here to reset