Near-optimal multiple testing in Bayesian linear models with finite-sample FDR control
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In high dimensional variable selection problems, statisticians often seek to design multiple testing procedures controlling the false discovery rate (FDR) and simultaneously discovering more relevant variables. Model-X methods, such as Knockoffs and conditional randomization tests, achieve the first goal of finite-sample FDR control under the assumption of known covariates distribution. However, it is not clear whether these methods can concurrently achieve the second goal of maximizing the number of discoveries. In fact, designing procedures to discover more relevant variables with finite-sample FDR control is a largely open question, even in the arguably simplest linear models. In this paper, we derive near-optimal testing procedures in high dimensional Bayesian linear models with isotropic covariates. We propose a Model-X multiple testing procedure, PoEdCe, which provably controls the frequentist FDR from finite samples even under model misspecification, and conjecturally achieves near-optimal power when the data follow the Bayesian linear model with a known prior. PoEdCe has three important ingredients: Posterior Expectation, distilled Conditional randomization test (dCRT), and the Benjamini-Hochberg procedure with e-values (eBH). The optimality conjecture of PoEdCe is based on a heuristic calculation of its asymptotic true positive proportion (TPP) and false discovery proportion (FDP), which is supported by methods from statistical physics as well as extensive numerical simulations. Furthermore, when the prior is unknown, we show that an empirical Bayes variant of PoEdCe still has finite-sample FDR control and achieves near-optimal power.
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