MultiPathGAN: Structure Preserving Stain Normalization using Unsupervised Multi-domain Adversarial Network with Perception Loss

04/20/2022
by   Haseeb Nazki, et al.
17

Histopathology relies on the analysis of microscopic tissue images to diagnose disease. A crucial part of tissue preparation is staining whereby a dye is used to make the salient tissue components more distinguishable. However, differences in laboratory protocols and scanning devices result in significant confounding appearance variation in the corresponding images. This variation increases both human error and the inter-rater variability, as well as hinders the performance of automatic or semi-automatic methods. In the present paper we introduce an unsupervised adversarial network to translate (and hence normalize) whole slide images across multiple data acquisition domains. Our key contributions are: (i) an adversarial architecture which learns across multiple domains with a single generator-discriminator network using an information flow branch which optimizes for perceptual loss, and (ii) the inclusion of an additional feature extraction network during training which guides the transformation network to keep all the structural features in the tissue image intact. We: (i) demonstrate the effectiveness of the proposed method firstly on H&E slides of 120 cases of kidney cancer, as well as (ii) show the benefits of the approach on more general problems, such as flexible illumination based natural image enhancement and light source adaptation.

READ FULL TEXT

page 4

page 5

page 6

page 8

page 9

research
02/03/2020

Pix2Pix-based Stain-to-Stain Translation: A Solution for Robust Stain Normalization in Histopathology Images Analysis

The diagnosis of cancer is mainly performed by visual analysis of the pa...
research
07/03/2022

Cycle-Interactive Generative Adversarial Network for Robust Unsupervised Low-Light Enhancement

Getting rid of the fundamental limitations in fitting to the paired trai...
research
06/04/2018

Adversarial Domain Adaptation for Classification of Prostate Histopathology Whole-Slide Images

Automatic and accurate Gleason grading of histopathology tissue slides i...
research
07/19/2017

Domain-adversarial neural networks to address the appearance variability of histopathology images

Preparing and scanning histopathology slides consists of several steps, ...
research
04/03/2017

Sparse Autoencoder for Unsupervised Nucleus Detection and Representation in Histopathology Images

Histopathology images are crucial to the study of complex diseases such ...
research
10/17/2018

Strategies for Training Stain Invariant CNNs

An important part of Digital Pathology is the analysis of multiple digit...
research
10/26/2018

Computational Histological Staining and Destaining of Prostate Core Biopsy RGB Images with Generative Adversarial Neural Networks

Histopathology tissue samples are widely available in two states: paraff...

Please sign up or login with your details

Forgot password? Click here to reset