Modernising the Design and Analysis of Prevalence Surveys for Neglected Tropical Diseases

06/14/2023
by   Peter J. Diggle, et al.
0

Current WHO guidelines set prevalence thresholds below which a Neglected Tropical Disease can be considered to have been eliminated as a public health problem, and specify how surveys to assess whether elimination has been achieved should be designed and analysed, based on classical survey sampling methods. In this paper we describe an alternative approach based on geospatial statistical modelling. We first show the gains in efficiency that can be obtained by exploiting any spatial correlation in the underlying prevalence surface. We then suggest that the current guidelines implicit use of a significance testing argument is not appropriate; instead, we argue for a predictive inferential framework, leading to design criteria based on controlling the rates at which areas whose true prevalence lies above and below the elimination threshold are incorrectly classified. We describe how this approach naturally accommodates context-specific information in the form of georeferenced covariates that have been shown to be predictive of disease prevalence. Finally, we give a progress report of an ongoing collaboration with the Guyana Ministry of Health Neglected Tropical Disease program on the design of an IDA (Ivermectin, Diethylcarbamazine and Albendazole) Impact Survey (IIS) of lymphatic filariasis to be conducted in Guyana in early 2023

READ FULL TEXT
research
02/18/2018

Geostatistical methods for disease mapping and visualization using data from spatio-temporally referenced prevalence surveys

In this paper we set out general principles and develop geostatistical m...
research
08/19/2020

Spatiotemporal mapping of malaria prevalence in Madagascar using routine surveillance and health survey data

Malaria transmission in Madagascar is highly heterogeneous, exhibiting s...
research
10/25/2021

Reconciling Risk Allocation and Prevalence Estimation in Public Health Using Batched Bandits

In many public health settings, there is a perceived tension between all...
research
09/18/2018

Pan-disease clustering analysis of the trend of period prevalence

For all diseases, prevalence has been carefully studied. In the "classic...
research
02/14/2020

Understanding the effects of dichotomization of continuous outcomes on geostatistical inference

Diagnosis is often based on the exceedance or not of continuous health i...
research
12/10/2020

PoolTestR: An R package for estimating prevalence and regression modelling with pooled samples

Pooled testing (also known as group testing), where diagnostic tests are...
research
04/06/2020

Sequential adaptive strategy for population-based sampling of a rare and clustered disease

An innovative sampling strategy is proposed, which applies to large-scal...

Please sign up or login with your details

Forgot password? Click here to reset