Minorization-Maximization-based Steepest Ascent for Large-scale Survival Analysis with Time-Varying Effects: Application to the National Kidney Transplant Dataset

12/27/2019
by   Kevin He, et al.
0

The time-varying effects model is a flexible and powerful tool for modeling the dynamic changes of covariate effects. However, in survival analysis, its computational burden increases quickly as the number of sample sizes or predictors grows. Traditional methods that perform well for moderate sample sizes and low-dimensional data do not scale to massive data. Analysis of national kidney transplant data with a massive sample size and large number of predictors defy any existing statistical methods and software. In view of these difficulties, we propose a Minorization-Maximization-based steepest ascent procedure for estimating the time-varying effects. Leveraging the block structure formed by the basis expansions, the proposed procedure iteratively updates the optimal block-wise direction along which the approximate increase in the log-partial likelihood is maximized. The resulting estimates ensure the ascent property and serve as refinements of the previous step. The performance of the proposed method is examined by simulations and applications to the analysis of national kidney transplant data.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
05/31/2022

A Soft-Thresholding Operator for Sparse Time-Varying Effects in Survival Models

We consider a class of Cox models with time-dependent effects that may b...
research
05/31/2020

Ensemble Methods for Survival Data with Time-Varying Covariates

We propose two new survival forests for survival data with time-varying ...
research
07/15/2019

Fast Algorithms and Theory for High-Dimensional Bayesian Varying Coefficient Models

Nonparametric varying coefficient (NVC) models are widely used for model...
research
01/11/2023

A degree-corrected Cox model for dynamic networks

Continuous time network data have been successfully modeled by multivari...
research
01/27/2017

Boosting hazard regression with time-varying covariates

Consider a left-truncated right-censored survival process whose evolutio...
research
04/02/2018

A Fast Divide-and-Conquer Sparse Cox Regression

We propose a computationally and statistically efficient divide-and-conq...
research
10/10/2022

Approximating Partial Likelihood Estimators via Optimal Subsampling

With the growing availability of large-scale biomedical data, it is ofte...

Please sign up or login with your details

Forgot password? Click here to reset