Learning Multi-Modal Volumetric Prostate Registration with Weak Inter-Subject Spatial Correspondence

02/09/2021
by   Oleksii Bashkanov, et al.
0

Recent studies demonstrated the eligibility of convolutional neural networks (CNNs) for solving the image registration problem. CNNs enable faster transformation estimation and greater generalization capability needed for better support during medical interventions. Conventional fully-supervised training requires a lot of high-quality ground truth data such as voxel-to-voxel transformations, which typically are attained in a too tedious and error-prone manner. In our work, we use weakly-supervised learning, which optimizes the model indirectly only via segmentation masks that are a more accessible ground truth than the deformation fields. Concerning the weak supervision, we investigate two segmentation similarity measures: multiscale Dice similarity coefficient (mDSC) and the similarity between segmentation-derived signed distance maps (SDMs). We show that the combination of mDSC and SDM similarity measures results in a more accurate and natural transformation pattern together with a stronger gradient coverage. Furthermore, we introduce an auxiliary input to the neural network for the prior information about the prostate location in the MR sequence, which mostly is available preoperatively. This approach significantly outperforms the standard two-input models. With weakly labelled MR-TRUS prostate data, we showed registration quality comparable to the state-of-the-art deep learning-based method.

READ FULL TEXT

page 2

page 3

research
08/23/2019

Mutual information neural estimation in CNN-based end-to-end medical image registration

Image registration is one of the most underlined processes in medical im...
research
04/17/2019

DeepAtlas: Joint Semi-Supervised Learning of Image Registration and Segmentation

Deep convolutional neural networks (CNNs) are state-of-the-art for seman...
research
07/09/2018

Weakly-Supervised Convolutional Neural Networks for Multimodal Image Registration

One of the fundamental challenges in supervised learning for multimodal ...
research
10/04/2019

NeurReg: Neural Registration and Its Application to Image Segmentation

Registration is a fundamental task in medical image analysis which can b...
research
10/02/2020

Weight Encode Reconstruction Network for Computed Tomography in a Semi-Case-Wise and Learning-Based Way

Classic algebraic reconstruction technology (ART) for computed tomograph...
research
02/28/2020

Neural Network Segmentation of Interstitial Fibrosis, Tubular Atrophy, and Glomerulosclerosis in Renal Biopsies

Glomerulosclerosis, interstitial fibrosis, and tubular atrophy (IFTA) ar...

Please sign up or login with your details

Forgot password? Click here to reset