Inference under Superspreading: Determinants of SARS-CoV-2 Transmission in Germany

11/08/2020
by   Patrick W. Schmidt, et al.
0

Superspreading complicates the study of SARS-CoV-2 transmission. I propose a model for aggregated case data that accounts for superspreading and improves statistical inference. In a Bayesian framework, the model is estimated on German data featuring over 60,000 cases with date of symptom onset and age group. Several factors were associated with a strong reduction in transmission: public awareness rising, testing and tracing, information on local incidence, and high temperature. Immunity after infection, school and restaurant closures, stay-at-home orders, and mandatory face covering were associated with a smaller reduction in transmission. The data suggests that public distancing rules increased transmission in young adults. Information on local incidence was associated with a reduction in transmission of up to 44 which suggests a prominent role of behavioral adaptations to local risk of infection. Testing and tracing reduced transmission by 15 where the effect was strongest among the elderly. Extrapolating weather effects, I estimate that transmission increases by 53 colder seasons.

READ FULL TEXT

page 21

page 24

research
08/30/2021

Optimal testing strategies to monitor COVID-19 traced contacts

The quarantine of identified close contacts has been vital to reducing t...
research
01/30/2019

A statistical modelling framework for mapping malaria seasonality

Many malaria-endemic areas experience seasonal fluctuations in cases bec...
research
03/15/2022

Estimating the potential to prevent locally acquired HIV infections in a UNAIDS Fast-Track City, Amsterdam

Amsterdam and other UNAIDS Fast-Track cities aim for zero new HIV infect...
research
10/29/2020

A statistical model to assess risk for supporting SARS-CoV-2 quarantine decisions

In February 2020 the first human infection with SARS-CoV-2 was reported ...
research
02/17/2022

Schedule-based Analysis of Transmission Risk in Public Transportation Systems

Airborne diseases, including COVID-19, raise the question of transmissio...
research
08/17/2021

Simulating COVID19 Transmission From Observed Movement: An Agent-Based Model of Classroom Dispersion

Current models of COVID-19 transmission predict infection from reported ...
research
04/13/2023

Bayesian mixture models for phylogenetic source attribution from consensus sequences and time since infection estimates

In stopping the spread of infectious diseases, pathogen genomic data can...

Please sign up or login with your details

Forgot password? Click here to reset