In Layman's Terms: Semi-Open Relation Extraction from Scientific Texts

05/15/2020
by   Ruben Kruiper, et al.
1

Information Extraction (IE) from scientific texts can be used to guide readers to the central information in scientific documents. But narrow IE systems extract only a fraction of the information captured, and Open IE systems do not perform well on the long and complex sentences encountered in scientific texts. In this work we combine the output of both types of systems to achieve Semi-Open Relation Extraction, a new task that we explore in the Biology domain. First, we present the Focused Open Biological Information Extraction (FOBIE) dataset and use FOBIE to train a state-of-the-art narrow scientific IE system to extract trade-off relations and arguments that are central to biology texts. We then run both the narrow IE system and a state-of-the-art Open IE system on a corpus of 10k open-access scientific biological texts. We show that a significant amount (65 uninformative Open IE extractions can be filtered using narrow IE extractions. Furthermore, we show that the retained extractions are significantly more often informative to a reader.

READ FULL TEXT

page 1

page 3

page 4

page 7

page 8

page 10

page 11

page 12

research
05/15/2020

A Scientific Information Extraction Dataset for Nature Inspired Engineering

Nature has inspired various ground-breaking technological developments i...
research
02/15/2018

Open Information Extraction on Scientific Text: An Evaluation

Open Information Extraction (OIE) is the task of the unsupervised creati...
research
11/19/2020

Entity Recognition and Relation Extraction from Scientific and Technical Texts in Russian

This paper is devoted to the study of methods for information extraction...
research
04/05/2017

MIT at SemEval-2017 Task 10: Relation Extraction with Convolutional Neural Networks

Over 50 million scholarly articles have been published: they constitute ...
research
12/14/2018

Inter-sentence Relation Extraction for Associating Biological Context with Events in Biomedical Texts

We present an analysis of the problem of identifying biological context ...
research
04/24/2019

A bag-of-concepts model improves relation extraction in a narrow knowledge domain with limited data

This paper focuses on a traditional relation extraction task in the cont...
research
07/10/2016

Open Information Extraction

Open Information Extraction (Open IE) systems aim to obtain relation tup...

Please sign up or login with your details

Forgot password? Click here to reset