Hamiltonian Monte Carlo Acceleration Using Surrogate Functions with Random Bases

06/18/2015
by   Cheng Zhang, et al.
0

For big data analysis, high computational cost for Bayesian methods often limits their applications in practice. In recent years, there have been many attempts to improve computational efficiency of Bayesian inference. Here we propose an efficient and scalable computational technique for a state-of-the-art Markov Chain Monte Carlo (MCMC) methods, namely, Hamiltonian Monte Carlo (HMC). The key idea is to explore and exploit the structure and regularity in parameter space for the underlying probabilistic model to construct an effective approximation of its geometric properties. To this end, we build a surrogate function to approximate the target distribution using properly chosen random bases and an efficient optimization process. The resulting method provides a flexible, scalable, and efficient sampling algorithm, which converges to the correct target distribution. We show that by choosing the basis functions and optimization process differently, our method can be related to other approaches for the construction of surrogate functions such as generalized additive models or Gaussian process models. Experiments based on simulated and real data show that our approach leads to substantially more efficient sampling algorithms compared to existing state-of-the art methods.

READ FULL TEXT

page 12

page 13

research
02/06/2016

Variational Hamiltonian Monte Carlo via Score Matching

Traditionally, the field of computational Bayesian statistics has been d...
research
10/15/2019

Challenges in Bayesian inference via Markov chain Monte Carlo for neural networks

Markov chain Monte Carlo (MCMC) methods and neural networks are instrume...
research
09/21/2021

Flexible and efficient Bayesian pharmacometrics modeling using Stan and Torsten, Part I

Stan is an open-source probabilistic programing language, primarily desi...
research
05/10/2021

Warped Gradient-Enhanced Gaussian Process Surrogate Models for Inference with Intractable Likelihoods

Markov chain Monte Carlo methods for intractable likelihoods, such as th...
research
12/22/2021

Surrogate Likelihoods for Variational Annealed Importance Sampling

Variational inference is a powerful paradigm for approximate Bayesian in...
research
06/20/2018

A Function Emulation Approach for Intractable Distributions

Doubly intractable distributions arise in many settings, for example in ...
research
04/20/2012

Efficient hierarchical clustering for continuous data

We present an new sequential Monte Carlo sampler for coalescent based Ba...

Please sign up or login with your details

Forgot password? Click here to reset