Good Data, Large Data, or No Data? Comparing Three Approaches in Developing Research Aspect Classifiers for Biomedical Papers

06/07/2023
by   Shreya Chandrasekhar, et al.
0

The rapid growth of scientific publications, particularly during the COVID-19 pandemic, emphasizes the need for tools to help researchers efficiently comprehend the latest advancements. One essential part of understanding scientific literature is research aspect classification, which categorizes sentences in abstracts to Background, Purpose, Method, and Finding. In this study, we investigate the impact of different datasets on model performance for the crowd-annotated CODA-19 research aspect classification task. Specifically, we explore the potential benefits of using the large, automatically curated PubMed 200K RCT dataset and evaluate the effectiveness of large language models (LLMs), such as LLaMA, GPT-3, ChatGPT, and GPT-4. Our results indicate that using the PubMed 200K RCT dataset does not improve performance for the CODA-19 task. We also observe that while GPT-4 performs well, it does not outperform the SciBERT model fine-tuned on the CODA-19 dataset, emphasizing the importance of a dedicated and task-aligned datasets dataset for the target task. Our code is available at https://github.com/Crowd-AI-Lab/CODA-19-exp.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
04/05/2022

The COVMis-Stance dataset: Stance Detection on Twitter for COVID-19 Misinformation

During the COVID-19 pandemic, large amounts of COVID-19 misinformation a...
research
06/15/2020

Document Classification for COVID-19 Literature

The global pandemic has made it more important than ever to quickly and ...
research
09/29/2022

TERMinator: A system for scientific texts processing

This paper is devoted to the extraction of entities and semantic relatio...
research
01/18/2022

Sectioning of Biomedical Abstracts: A Sequence of Sequence Classification Task

Rapid growth of the biomedical literature has led to many advances in th...
research
09/29/2022

Evaluating Research Dataset Recommendations in a Living Lab

The search for research datasets is as important as laborious. Due to th...
research
04/03/2023

Spam-T5: Benchmarking Large Language Models for Few-Shot Email Spam Detection

This paper investigates the effectiveness of large language models (LLMs...
research
05/05/2020

SLEDGE: A Simple Yet Effective Baseline for Coronavirus Scientific Knowledge Search

With worldwide concerns surrounding the Severe Acute Respiratory Syndrom...

Please sign up or login with your details

Forgot password? Click here to reset