Generalizability issues with deep learning models in medicine and their potential solutions: illustrated with Cone-Beam Computed Tomography (CBCT) to Computed Tomography (CT) i

04/16/2020
by   Xiao Liang, et al.
0

Generalizability is a concern when applying a deep learning (DL) model trained on one dataset to other datasets. Training a universal model that works anywhere, anytime, for anybody is unrealistic. In this work, we demonstrate the generalizability problem, then explore potential solutions based on transfer learning (TL) by using the cone-beam computed tomography (CBCT) to computed tomography (CT) image conversion task as the testbed. Previous works have converted CBCT to CT-like images. However, all of those works studied only one or two anatomical sites and used images from the same vendor's scanners. Here, we investigated how a model trained for one machine and one anatomical site works on other machines and other sites. We trained a model on CBCT images acquired from one vendor's scanners for head and neck cancer patients and applied it to images from another vendor's scanners and for other disease sites. We found that generalizability could be a significant problem for this particular application when applying a trained DL model to datasets from another vendor's scanners. We then explored three practical solutions based on TL to solve this generalization problem: the target model, which is trained on a target domain from scratch; the combined model, which is trained on both source and target domain datasets from scratch; and the adapted model, which fine-tunes the trained source model to a target domain. We found that when there are sufficient data in the target domain, all three models can achieve good performance. When the target dataset is limited, the adapted model works the best, which indicates that using the fine-tuning strategy to adapt the trained model to an unseen target domain dataset is a viable and easy way to implement DL models in the clinic.

READ FULL TEXT

page 3

page 14

page 15

page 16

page 17

page 18

page 19

page 20

research
05/07/2021

Self-Adaptive Transfer Learning for Multicenter Glaucoma Classification in Fundus Retina Images

The early diagnosis and screening of glaucoma are important for patients...
research
01/10/2022

Head2Toe: Utilizing Intermediate Representations for Better Transfer Learning

Transfer-learning methods aim to improve performance in a data-scarce ta...
research
11/26/2022

Cross-domain Microscopy Cell Counting by Disentangled Transfer Learning

Microscopy cell images of biological experiments on different tissues/or...
research
08/25/2022

Multi-Scale Multi-Target Domain Adaptation for Angle Closure Classification

Deep learning (DL) has made significant progress in angle closure classi...
research
05/18/2023

BlindHarmony: "Blind" Harmonization for MR Images via Flow model

In MRI, images of the same contrast (e.g., T1) from the same subject can...
research
07/12/2021

Training deep cross-modality conversion models with a small amount of data and its application to MVCT to kVCT conversion

Deep-learning-based image processing has emerged as a valuable tool in r...
research
01/23/2023

Toward Foundation Models for Earth Monitoring: Generalizable Deep Learning Models for Natural Hazard Segmentation

Climate change results in an increased probability of extreme weather ev...

Please sign up or login with your details

Forgot password? Click here to reset