Finding our Way in the Dark: Approximate MCMC for Approximate Bayesian Methods

05/16/2019
by   Evgeny Levi, et al.
0

With larger data at their disposal, scientists are emboldened to tackle complex questions that require sophisticated statistical models. It is not unusual for the latter to have likelihood functions that elude analytical formulations. Even under such adversity, when one can simulate from the sampling distribution, Bayesian analysis can be conducted using approximate methods such as Approximate Bayesian Computation (ABC) or Bayesian Synthetic Likelihood (BSL). A significant drawback of these methods is that the number of required simulations can be prohibitively large, thus severely limiting their scope. In this paper we design perturbed MCMC samplers that can be used within the ABC and BSL paradigms to significantly accelerate computation while maintaining control on computational efficiency. The proposed strategy relies on recycling samples from the chain's past. The algorithmic design is supported by a theoretical analysis while practical performance is examined via a series of simulation examples and data analyses.

READ FULL TEXT
research
10/06/2022

Approximate Methods for Bayesian Computation

Rich data generating mechanisms are ubiquitous in this age of informatio...
research
08/24/2022

The premise of approximate MCMC in Bayesian deep learning

This paper identifies several characteristics of approximate MCMC in Bay...
research
04/09/2020

Adaptive MCMC for synthetic likelihoods and correlated synthetic likelihoods

Approximate Bayesian computation (ABC) and synthetic likelihood (SL) are...
research
05/20/2019

Stratified sampling and resampling for approximate Bayesian computation

Approximate Bayesian computation (ABC) is computationally intensive for ...
research
07/20/2021

JAGS, NIMBLE, Stan: a detailed comparison among Bayesian MCMC software

The aim of this work is the comparison of the performance of the three p...
research
06/21/2019

Adaptive Approximate Bayesian Computation Tolerance Selection

Approximate Bayesian Computation (ABC) methods are increasingly used for...
research
02/17/2023

Piecewise Deterministic Markov Processes for Bayesian Neural Networks

Inference on modern Bayesian Neural Networks (BNNs) often relies on a va...

Please sign up or login with your details

Forgot password? Click here to reset