EigenRank by Committee: A Data Subset Selection and Failure Prediction paradigm for Robust Deep Learning based Medical Image Segmentation

08/17/2019
by   Bilwaj Gaonkar, et al.
17

Translation of fully automated deep learning based medical image segmentation technologies to clinical workflows face two main algorithmic challenges. The first, is the collection and archival of large quantities of manually annotated ground truth data for both training and validation. The second is the relative inability of the majority of deep learning based segmentation techniques to alert physicians to a likely segmentation failure. Here we propose a novel algorithm, named `Eigenrank' which addresses both of these challenges. Eigenrank can select for manual labeling, a subset of medical images from a large database, such that a U-Net trained on this subset is superior to one trained on a randomly selected subset of the same size. Eigenrank can also be used to pick out, cases in a large database, where deep learning segmentation will fail. We present our algorithm, followed by results and a discussion of how Eigenrank exploits the Von Neumann information to perform both data subset selection and failure prediction for medical image segmentation using deep learning.

READ FULL TEXT

page 1

page 3

page 5

page 6

research
04/17/2022

U-Net and its variants for Medical Image Segmentation : A short review

The paper is a short review of medical image segmentation using U-Net an...
research
12/30/2022

Informing selection of performance metrics for medical image segmentation evaluation using configurable synthetic errors

Machine learning-based segmentation in medical imaging is widely used in...
research
03/17/2019

SuperPatchMatch: an Algorithm for Robust Correspondences using Superpixel Patches

Superpixels have become very popular in many computer vision application...
research
10/03/2018

Extreme Augmentation : Can deep learning based medical image segmentation be trained using a single manually delineated scan?

Yes, it can. Data augmentation is perhaps the oldest preprocessing step ...
research
03/16/2020

LT-Net: Label Transfer by Learning Reversible Voxel-wise Correspondence for One-shot Medical Image Segmentation

We introduce a one-shot segmentation method to alleviate the burden of m...
research
06/25/2023

Introducing A Novel Method For Adaptive Thresholding In Brain Tumor Medical Image Segmentation

One of the most significant challenges in the field of deep learning and...
research
07/19/2022

Segmentation of 3D Dental Images Using Deep Learning

3D image segmentation is a recent and crucial step in many medical analy...

Please sign up or login with your details

Forgot password? Click here to reset