DKMA-ULD: Domain Knowledge augmented Multi-head Attention based Robust Universal Lesion Detection

03/14/2022
by   Manu Sheoran, et al.
0

Incorporating data-specific domain knowledge in deep networks explicitly can provide important cues beneficial for lesion detection and can mitigate the need for diverse heterogeneous datasets for learning robust detectors. In this paper, we exploit the domain information present in computed tomography (CT) scans and propose a robust universal lesion detection (ULD) network that can detect lesions across all organs of the body by training on a single dataset, DeepLesion. We analyze CT-slices of varying intensities, generated using heuristically determined Hounsfield Unit(HU) windows that individually highlight different organs and are given as inputs to the deep network. The features obtained from the multiple intensity images are fused using a novel convolution augmented multi-head self-attention module and subsequently, passed to a Region Proposal Network (RPN) for lesion detection. In addition, we observed that traditional anchor boxes used in RPN for natural images are not suitable for lesion sizes often found in medical images. Therefore, we propose to use lesion-specific anchor sizes and ratios in the RPN for improving the detection performance. We use self-supervision to initialize weights of our network on the DeepLesion dataset to further imbibe domain knowledge. Our proposed Domain Knowledge augmented Multi-head Attention based Universal Lesion Detection Network DMKA-ULD produces refined and precise bounding boxes around lesions across different organs. We evaluate the efficacy of our network on the publicly available DeepLesion dataset which comprises of approximately 32K CT scans with annotated lesions across all organs of the body. Results demonstrate that we outperform existing state-of-the-art methods achieving an overall sensitivity of 87.16

READ FULL TEXT

page 1

page 3

page 5

page 8

page 9

page 14

page 16

research
03/30/2022

An Efficient Anchor-free Universal Lesion Detection in CT-scans

Existing universal lesion detection (ULD) methods utilize compute-intens...
research
09/10/2019

MVP-Net: Multi-view FPN with Position-aware Attention for Deep Universal Lesion Detection

Universal lesion detection (ULD) on computed tomography (CT) images is a...
research
08/29/2019

3D Anchor-Free Lesion Detector on Computed Tomography Scans

Lesions are injuries and abnormal tissues in the human body. Detecting l...
research
08/12/2019

MULAN: Multitask Universal Lesion Analysis Network for Joint Lesion Detection, Tagging, and Segmentation

When reading medical images such as a computed tomography (CT) scan, rad...
research
02/25/2019

Detecting Lesion Bounding Ellipses With Gaussian Proposal Networks

Lesions characterized by computed tomography (CT) scans, are arguably of...
research
04/30/2019

A self-attention based deep learning method for lesion attribute detection from CT reports

In radiology, radiologists not only detect lesions from the medical imag...
research
06/09/2017

An Ensemble Deep Learning Based Approach for Red Lesion Detection in Fundus Images

Diabetic retinopathy is one of the leading causes of preventable blindne...

Please sign up or login with your details

Forgot password? Click here to reset