CRISP - Reliable Uncertainty Estimation for Medical Image Segmentation

06/15/2022
by   Thierry Judge, et al.
0

Accurate uncertainty estimation is a critical need for the medical imaging community. A variety of methods have been proposed, all direct extensions of classification uncertainty estimations techniques. The independent pixel-wise uncertainty estimates, often based on the probabilistic interpretation of neural networks, do not take into account anatomical prior knowledge and consequently provide sub-optimal results to many segmentation tasks. For this reason, we propose CRISP a ContRastive Image Segmentation for uncertainty Prediction method. At its core, CRISP implements a contrastive method to learn a joint latent space which encodes a distribution of valid segmentations and their corresponding images. We use this joint latent space to compare predictions to thousands of latent vectors and provide anatomically consistent uncertainty maps. Comprehensive studies performed on four medical image databases involving different modalities and organs underlines the superiority of our method compared to state-of-the-art approaches.

READ FULL TEXT

page 3

page 7

page 13

research
03/31/2023

Directional Connectivity-based Segmentation of Medical Images

Anatomical consistency in biomarker segmentation is crucial for many med...
research
07/07/2019

Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation

Despite the recent improvements in overall accuracy, deep learning syste...
research
07/31/2023

Investigating and Improving Latent Density Segmentation Models for Aleatoric Uncertainty Quantification in Medical Imaging

Data uncertainties, such as sensor noise or occlusions, can introduce ir...
research
04/12/2020

Improving Calibration and Out-of-Distribution Detection in Medical Image Segmentation with Convolutional Neural Networks

Convolutional Neural Networks (CNNs) are powerful medical image segmenta...
research
07/26/2022

Generalized Probabilistic U-Net for medical image segementation

We propose the Generalized Probabilistic U-Net, which extends the Probab...
research
02/06/2023

Probabilistic Contrastive Learning Recovers the Correct Aleatoric Uncertainty of Ambiguous Inputs

Contrastively trained encoders have recently been proven to invert the d...
research
05/13/2023

Towards Generalizable Medical Image Segmentation with Pixel-wise Uncertainty Estimation

Deep neural networks (DNNs) achieve promising performance in visual reco...

Please sign up or login with your details

Forgot password? Click here to reset