BetheSF: Efficient computation of the exact tagged-particle propagator in single-file systems via the Bethe eigenspectrum

03/20/2020
by   Alessio Lapolla, et al.
0

Single-file diffusion is a paradigm for strongly correlated classical stochastic many-body dynamics and has widespread applications in soft condensed matter and biophysics. However, exact results for single-file systems are sparse and limited to the simplest scenarios. We present an algorithm for computing the non-Markovian time-dependent conditional probability density function of a tagged-particle in a single-file of N particles diffusing in a confining external potential. The algorithm implements an eigenexpansion of the full interacting many-body problem obtained by means of the coordinate Bethe ansatz. While formally exact, the Bethe eigenspectrum involves the generation and evaluation of permutations, which becomes unfeasible for single-files with an increasing number of particles N. Here we exploit the underlying exchange symmetries between the particles to the left and to the right of the tagged-particle and show that it is possible to reduce the complexity of the algorithm from the worst case scenario 𝒪(N!) down to 𝒪(N). A C++ code to calculate the non-Markovian probability density function using this algorithm is provided. Solutions for simple model potentials are readily implemented incl. single-file diffusion in a flat and a 'tilted' box, as well as in a parabolic potential. Notably, the program allows for implementations of solutions in arbitrary external potentials under the condition that the user can supply solutions to the respective single-particle eigenspectra.

READ FULL TEXT

page 1

page 2

page 3

page 4

research
12/16/2019

The Random Batch Method for N-Body Quantum Dynamics

This paper discusses a numerical method for computing the evolution of l...
research
06/01/2020

Interacting particle solutions of Fokker-Planck equations through gradient-log-density estimation

Fokker-Planck equations are extensively employed in various scientific f...
research
10/14/2020

Scalable Graph Networks for Particle Simulations

Learning system dynamics directly from observations is a promising direc...
research
09/14/2021

The Dean-Kawasaki equation and the structure of density fluctuations in systems of diffusing particles

The Dean-Kawasaki equation - a strongly singular SPDE - is a basic equat...
research
07/25/2019

WVTICs -- SPH initial conditions for everyone

We present a novel and fast application to generate glass-like initial c...
research
04/11/2023

Simulations of quantum dynamics with fermionic phase-space representations using numerical matrix factorizations as stochastic gauges

The Gaussian phase-space representation can be used to implement quantum...
research
05/25/2016

As-exact-as-possible repair of unprintable STL files

The class of models that can be represented by STL files is larger than ...

Please sign up or login with your details

Forgot password? Click here to reset