Bayesian Prevalence Estimation from Pooled and Individual Data

08/21/2023
by   Matthew Ritch, et al.
0

Pooled and individual disease testing are common methods for determining the population prevalences of diseases. Recently, researchers have used Monte Carlo Markov Chain methods to estimate population prevalence from the combined streams of these two types of testing data. We propose an analytical solution for estimating population prevalence from combined individual and pooled binary sampling data. We also use simulated sampling data to characterize these posterior distributions under a variety of sampling conditions, including a range of true prevalences, variable numbers of pooled and individual tests, variable number of individual samples per pooled sample, and a range of values for test sensitivity and specificity.

READ FULL TEXT

page 12

page 14

page 17

page 18

research
09/11/2020

Bayesian Beta-Binomial Prevalence Estimation Using an Imperfect Test

Following [Diggle 2011, Greenland 1995], we give a simple formula for th...
research
11/11/2021

Pool samples to efficiently estimate pathogen prevalence dynamics

Estimating the prevalence of a disease is necessary for evaluating and m...
research
01/03/2022

A sampling scheme for estimating the prevalence of a pandemic

The spread of COVID-19 makes it essential to investigate its prevalence....
research
12/10/2020

PoolTestR: An R package for estimating prevalence and regression modelling with pooled samples

Pooled testing (also known as group testing), where diagnostic tests are...
research
02/07/2023

Enhanced Inference for Finite Population Sampling-Based Prevalence Estimation with Misclassification Errors

Epidemiologic screening programs often make use of tests with small, but...
research
11/11/2020

Sampling designs for epidemic prevalence estimation

Intuitively, sampling is likely to be more efficient for prevalence esti...
research
11/18/2020

Estimating Seroprevalence of SARS-CoV-2 in Ohio: A Bayesian Multilevel Poststratification Approach with Multiple Diagnostic Tests

Globally the SARS-CoV-2 coronavirus has infected more than 59 million pe...

Please sign up or login with your details

Forgot password? Click here to reset