Achieving the Capacity of a DNA Storage Channel with Linear Coding Schemes

12/02/2021
by   Kel Levick, et al.
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Due to the redundant nature of DNA synthesis and sequencing technologies, a basic model for a DNA storage system is a multi-draw "shuffling-sampling" channel. In this model, a random number of noisy copies of each sequence is observed at the channel output. Recent works have characterized the capacity of such a DNA storage channel under different noise and sequencing models, relying on sophisticated typicality-based approaches for the achievability. Here, we consider a multi-draw DNA storage channel in the setting of noise corruption by a binary erasure channel. We show that, in this setting, the capacity is achieved by linear coding schemes. This leads to a considerably simpler derivation of the capacity expression of a multi-draw DNA storage channel than existing results in the literature.

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