A random shuffle method to expand a narrow dataset and overcome the associated challenges in a clinical study: a heart failure cohort example

12/12/2020
by   Lorenzo Fassina, et al.
0

Heart failure (HF) affects at least 26 million people worldwide, so predicting adverse events in HF patients represents a major target of clinical data science. However, achieving large sample sizes sometimes represents a challenge due to difficulties in patient recruiting and long follow-up times, increasing the problem of missing data. To overcome the issue of a narrow dataset cardinality (in a clinical dataset, the cardinality is the number of patients in that dataset), population-enhancing algorithms are therefore crucial. The aim of this study was to design a random shuffle method to enhance the cardinality of an HF dataset while it is statistically legitimate, without the need of specific hypotheses and regression models. The cardinality enhancement was validated against an established random repeated-measures method with regard to the correctness in predicting clinical conditions and endpoints. In particular, machine learning and regression models were employed to highlight the benefits of the enhanced datasets. The proposed random shuffle method was able to enhance the HF dataset cardinality (711 patients before dataset preprocessing) circa 10 times and circa 21 times when followed by a random repeated-measures approach. We believe that the random shuffle method could be used in the cardiovascular field and in other data science problems when missing data and the narrow dataset cardinality represent an issue.

READ FULL TEXT

page 1

page 4

research
06/04/2022

Missing data imputation for a multivariate outcome of mixed variable types

Data collected in clinical trials are often composed of multiple types o...
research
03/14/2022

Similarity-based prediction of Ejection Fraction in Heart Failure Patients

Biomedical research is increasingly employing real world evidence (RWE) ...
research
08/02/2019

Identifying Treatment Effects using Trimmed Means when Data are Missing Not at Random

Patients often discontinue treatment in a clinical trial because their h...
research
02/10/2023

Predicting the cardinality of a reduced Gröbner basis

We use ansatz neural network models to predict key metrics of complexity...
research
08/02/2022

Enabling scalable clinical interpretation of ML-based phenotypes using real world data

The availability of large and deep electronic healthcare records (EHR) d...
research
07/26/2022

Risk-Adjusted Incidence Modeling on Hierarchical Survival Data with Recurrent Events

There is a constant need for many healthcare programs to timely address ...
research
05/27/2021

Quantile Encoder: Tackling High Cardinality Categorical Features in Regression Problems

Regression problems have been widely studied in machinelearning literatu...

Please sign up or login with your details

Forgot password? Click here to reset